STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00019Kinesin protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1999 aa)    
Predicted Functional Partners:
FGIG_01523
Kinesin-associated protein 3.
   
 0.846
FGIG_04022
Ubiquitin carboxyl terminal hydrolase BAP1.
    
 0.723
FGIG_00980
Ubiquitin carboxyl-terminal hydrolase.
    
 0.723
FGIG_05315
Uncharacterized protein.
    
 0.690
FGIG_05917
Intraflagellar transport protein.
    
 0.668
FGIG_01078
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.659
FGIG_08587
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
  0.627
FGIG_00271
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
  0.627
FGIG_03087
ADP ribosylation factor protein 5B; Belongs to the small GTPase superfamily. Arf family.
    
  0.627
FGIG_08984
ARF small monomeric GTPase; Belongs to the small GTPase superfamily. Arf family.
    
  0.627
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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