STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_01905Charged multivesicular body protein 3. (218 aa)    
Predicted Functional Partners:
FGIG_07310
Charged multivesicular body protein 2a.
   
0.990
FGIG_07778
Protein involved in glucose derepression and pre-vacuolar endosome protein sorting.
   
 0.989
FGIG_08705
Charged multivesicular body protein 1.
   
 0.986
FGIG_02077
Vacuolar protein-sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.942
FGIG_01956
Charged multivesicular body protein 7.
   
 0.910
FGIG_07489
Uncharacterized protein.
   
 0.903
FGIG_03444
ELL complex EAP30 subunit.
    
 0.883
FGIG_12547
Charged multivesicular body protein 5b.
   
 0.882
FGIG_12546
Charged multivesicular body protein 5 (Chromatin-modifying protein 5).
   
 0.882
FGIG_00132
Vacuolar protein sorting-associated protein VTA1.
    
 0.857
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.