STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_06707Scm protein containing 4 mbt domains (Sfmbt). (1248 aa)    
Predicted Functional Partners:
FGIG_01784
RanBP2-type domain-containing protein.
    
 0.882
FGIG_04114
E3 ubiquitin-protein ligase RING2-A.
    
 0.855
FGIG_10645
Putative chromobox protein.
   
 0.832
FGIG_06985
Polycomb group RING finger protein 3.
   
 0.788
FGIG_00673
Putative transcription factor.
    
 0.782
FGIG_01928
Enhancer of zeste.
   
 0.764
FGIG_12080
Uncharacterized protein.
    
 0.756
FGIG_08264
Uncharacterized protein.
    
 0.756
FGIG_03998
Uncharacterized protein.
    
 0.756
FGIG_12499
Putative tRNA pseudouridine synthase Pus10.
    
 0.753
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.