STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00607RUN and SH3 domain-containing protein 1. (1534 aa)    
Predicted Functional Partners:
FGIG_08144
Small guanosine triphosphatase family Ras in brain (Rab) family protein.
    
 
 0.914
FGIG_05936
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.889
FGIG_11848
Isopentenyl-diphosphate delta-isomerase I.
  
 
 0.883
FGIG_01650
UPF0551 protein C8orf38 mitochondrial.
  
 0.879
FGIG_10252
Geranylgeranyl diphosphate synthase type III; Belongs to the FPP/GGPP synthase family.
    
 0.856
FGIG_09501
Decaprenyl-diphosphate synthase subunit; Belongs to the FPP/GGPP synthase family.
    
 0.810
FGIG_03159
Decaprenyl-diphosphate synthase subunit 2.
    
 0.810
FGIG_12493
Ditrans polycis-polyprenyl diphosphate synthase ((2E 6E)-farnesyl diphosphate specific).
  
 
 0.792
FGIG_04854
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.791
FGIG_10342
tRNA dimethylallyltransferase; Belongs to the IPP transferase family.
    
 0.767
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.