STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_06788Transcription elongation factor B polypeptide 3. (605 aa)    
Predicted Functional Partners:
FGIG_10619
RNA polymerase-associated protein LEO1.
    
 0.998
FGIG_04261
RNA polymerase II transcription elongation factor; Belongs to the SKP1 family.
    
 0.995
FGIG_06007
Putative rna polymerase ii transcription elongation factor elongin/siii subunit elongin b.
    
 0.956
FGIG_06612
Ribosomal protein l5.
    
 
 0.935
FGIG_05327
Eukaryotic ribosomal protein L18.
   
   0.929
FGIG_00988
Large subunit ribosomal protein 27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.925
FGIG_07430
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.924
FGIG_07507
Ribosomal protein L35.
    
   0.924
FGIG_03448
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.924
FGIG_11393
Large subunit ribosomal protein L22e.
    
   0.924
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.