STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_08777RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1221 aa)    
Predicted Functional Partners:
FGIG_00310
Uncharacterized protein.
   
 
 0.999
FGIG_04542
Putative WD repeat-containing protein.
   
 
 0.999
FGIG_01197
Uncharacterized protein.
   
 
 0.999
FGIG_01904
Nucleolar protein 14.
   
 
 0.999
FGIG_10739
Ribosome biogenesis protein BMS1.
   
 
 0.999
FGIG_11664
Nucleolar protein 6.
   
 
 0.999
FGIG_01553
WD repeat containing protein 36.
   
 
 0.999
FGIG_10807
Nucleolar protein 10.
   
 
 0.999
FGIG_12006
Uncharacterized protein.
   
 
 0.999
FGIG_03389
HEAT repeat-containing protein 1.
   
 
 0.999
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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