STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_04053Uncharacterized protein. (1271 aa)    
Predicted Functional Partners:
FGIG_01649
Nuclear receptor corepressor 1.
    
 0.973
FGIG_01881
Med1 domain-containing protein.
    
 0.905
FGIG_07167
Nuclear receptor subfamily 1 group I.
   
0.895
FGIG_06873
Nuclear receptor nhr-48.
   
 0.895
FGIG_02748
Nuclear receptor subfamily 4 group A member 1.
    
0.876
FGIG_03299
Thyroid hormone receptor beta-A.
    
 0.813
FGIG_04043
Vitamin D3 receptor B.
    
0.813
FGIG_03298
Uncharacterized protein.
    
 0.813
FGIG_07307
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.800
FGIG_02131
Mediator of RNA polymerase II transcription subunit 17.
    
 0.789
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.