STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_0352PFAM: glycoside hydrolase family 12; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: endoglucanase, putative; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (393 aa)    
Predicted Functional Partners:
Tbis_2634
PFAM: glycoside hydrolase family 10; Ricin B lectin; SMART: glycoside hydrolase family 10; Ricin B lectin; KEGG: glycosyl hydrolase family 10 protein.
   
 0.916
Tbis_0819
Pectate lyase; KEGG: hypothetical protein; PFAM: Pectate lyase; Ricin B lectin; SMART: Ricin B lectin.
 
 
 0.785
Tbis_2774
PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: hch:HCH_02464 cellulase.
  
     0.769
Tbis_0437
Endo-1,4-beta-xylanase; KEGG: sde:Sde_3061 xylanase/chitin deacetylase-like; PFAM: glycoside hydrolase family 11; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
     0.748
Tbis_2773
KEGG: scl:sce2212 putative topoisomerase.
 
     0.708
Tbis_1087
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: bsu:BSU07560 pectate lyase.
 
   
 0.638
Tbis_0843
PFAM: Carbohydrate binding family 6; glycoside hydrolase family 16; SMART: cellulose binding type IV; KEGG: hypothetical protein.
 
   
 0.608
Tbis_0350
KEGG: scl:sce6752 hypothetical protein.
  
 
   0.572
Tbis_3482
PFAM: lipolytic protein G-D-S-L family; KEGG: lysophospholipase L1 and related esterases.
 
 
 0.556
Tbis_1022
PFAM: Fibronectin type III domain protein; Carbohydrate-binding family V/XII; SMART: Fibronectin type III domain protein; Carbohydrate-binding family V/XII; KEGG: azc:AZC_2901 type III fibronectin.
  
     0.536
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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