STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1383PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: met:M446_5445 ATPase. (318 aa)    
Predicted Functional Partners:
Tbis_1384
PFAM: VWA containing CoxE family protein; KEGG: rso:RSc1465 hypothetical protein.
 
   
 0.957
Tbis_1385
PFAM: protein of unknown function DUF182; KEGG: dsh:Dshi_2351 hypothetical protein.
 
     0.845
Tbis_1386
KEGG: mag:amb2880 purine catabolism protein PucB.
 
     0.843
Tbis_2227
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bpy:Bphyt_0365 carbon monoxide dehydrogenase subunit G.
 
   
 0.779
Tbis_0644
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rce:RC1_1075 carbon monoxide dehydrogenase large chain.
 
   
 0.773
Tbis_0642
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bav:BAV2735 subunit of carbon monoxide dehydrogenase.
 
   
 0.738
Tbis_0643
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A2144 carbon monoxide dehydrogenase, medium subunit.
 
   
 0.718
Tbis_2228
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rpb:RPB_3096 carbon-monoxide dehydrogenase.
 
   
 0.548
Tbis_1382
KEGG: pzu:PHZ_c1400 hypothetical protein.
       0.508
Tbis_2230
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rpb:RPB_3104 molybdopterin dehydrogenase, FAD- binding.
 
   
 0.508
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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