STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0079PFAM: CHAP domain containing protein; KEGG: bam:Bamb_5483 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Cwoe_1666
PFAM: Lytic transglycosylase catalytic; KEGG: clec-200; C-type LECtin.
 
   
 0.788
Cwoe_5785
KEGG: ank:AnaeK_0616 transcriptional regulator-like protein.
  
     0.750
Cwoe_0085
PFAM: protein of unknown function DUF354; KEGG: lch:Lcho_1392 hypothetical protein.
  
     0.738
Cwoe_1626
PFAM: Mammalian cell entry related domain protein; KEGG: scl:sce7646 ABC-type organic solvent transporter, solute-binding periplasmic protein.
  
   
 0.732
Cwoe_1624
PFAM: Mammalian cell entry related domain protein; KEGG: ppw:PputW619_4255 hypothetical protein.
  
   
 0.730
Cwoe_1622
PFAM: Mammalian cell entry related domain protein; KEGG: bmt:BSUIS_A1064 hypothetical protein.
  
   
 0.716
Cwoe_5512
PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat; KEGG: acp:A2cp1_0454 MJ0042 family finger-like protein.
  
     0.714
Cwoe_5882
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: SNF2 superfamily protein.
  
     0.707
Cwoe_1331
KEGG: hypothetical protein.
 
   
 0.696
Cwoe_5297
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_1052 O-antigen polymerase family protein.
 
     0.694
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.