STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0907PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: asa:ASA_3697 AsnC family transcriptional regulator. (168 aa)    
Predicted Functional Partners:
Cwoe_2186
PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
  
     0.754
Cwoe_2602
PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
  
     0.670
Cwoe_0908
KEGG: scl:sce0438 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein.
  
  
 0.593
Cwoe_0909
Cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: ank:AnaeK_3764 cystathionine gamma-lyase.
       0.573
Cwoe_1817
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: mca:MCA2039 glutamate synthase, large subunit.
     
 0.442
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.