STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0938PFAM: Polyketide cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein. (169 aa)    
Predicted Functional Partners:
Cwoe_5248
Hypothetical protein.
  
     0.626
Cwoe_0937
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO5521 M20/M25/M40 family peptidase.
  
   0.567
Cwoe_0936
PFAM: peptidase M24; KEGG: Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
   
   0.563
Cwoe_0939
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0585 hypothetical protein.
       0.542
Cwoe_3146
PFAM: GAF domain protein; ANTAR domain protein; SMART: GAF domain protein; KEGG: scl:sce0195 two-component sensor histidine kinase.
  
     0.505
Cwoe_3147
Hypothetical protein.
  
     0.496
Cwoe_2260
PFAM: zinc/iron permease; KEGG: avn:Avin_15240 integral membrane protein.
 
 
   0.490
Cwoe_1300
KEGG: acp:A2cp1_0251 FAD dependent oxidoreductase.
  
  
 0.485
Cwoe_0934
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: vvu:VV1_2808 selenocysteine lyase.
 
     0.475
Cwoe_2072
PFAM: protein of unknown function DUF883 ElaB; KEGG: noc:Noc_1592 hypothetical protein.
  
     0.464
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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