STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1548PFAM: polysaccharide deacetylase; KEGG: reu:Reut_B3928 polysaccharide deacetylase. (235 aa)    
Predicted Functional Partners:
Cwoe_4796
PFAM: glycosyl transferase family 2; KEGG: nis:NIS_0181 glucosaminyltransferase.
  
 0.612
Cwoe_1549
KEGG: hypothetical protein.
  
  
 0.600
Cwoe_1375
PFAM: glycosyl transferase family 2; chitin synthase; KEGG: dma:DMR_08420 glycosyltransferase.
  
 0.554
Cwoe_1577
PFAM: glycosyl transferase family 2; KEGG: smt:Smal_3168 glycosyl transferase family 2.
 
  
 0.554
Cwoe_5459
PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: mxa:MXAN_4616 glycosyl transferase family protein.
 
  
 0.543
Cwoe_5482
KEGG: kpu:KP1_0662 hypothetical protein.
  
  
 0.479
Cwoe_0161
PFAM: glycosyl transferase family 2; KEGG: xac:XAC1811 N-glycosyltransferase PgaC.
  
  
 0.442
Cwoe_0096
PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_2016 glycosyl transferase family protein.
  
  
 0.439
Cwoe_0888
Glycosyltransferase-likw protein probably involved in cell wall biogenesis; KEGG: hha:Hhal_0208 cellulose synthase (UDP- forming).
  
  
 0.439
Cwoe_5332
PFAM: glycosyl transferase family 2; KEGG: dol:Dole_2860 putative glucosyl-3- phosphoglycerate synthase.
  
  
 0.439
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.