STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2474TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: aav:Aave_4277 hypothetical protein. (1293 aa)    
Predicted Functional Partners:
Cwoe_5218
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical protein.
 
     0.586
Cwoe_2475
KEGG: cja:CJA_2305 hypothetical protein.
       0.579
Cwoe_2478
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbc:CbuK_1332 glyoxalase family protein.
 
     0.557
Cwoe_1429
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family.
  
     0.520
Cwoe_5363
SMART: LamG domain protein jellyroll fold domain protein; KEGG: gur:Gura_3011 LamG domain-containing protein.
 
     0.519
Cwoe_3431
Hypothetical protein; KEGG: mxa:MXAN_0327 triple helix repeat-containing collagen.
  
     0.481
Cwoe_2472
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xop:PXO_04459 two-component system regulatory protein.
       0.451
Cwoe_2473
Integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 putative two-component system sensor kinase.
       0.451
Cwoe_2721
KEGG: lch:Lcho_0655 hypothetical protein.
  
     0.451
Cwoe_0166
PFAM: Protein of unknown function DUF1800; KEGG: bcj:BCAL2009 hypothetical protein.
  
     0.420
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.