STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2600PFAM: aminotransferase class-III; KEGG: bvi:Bcep1808_6590 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (464 aa)    
Predicted Functional Partners:
Cwoe_2601
PFAM: Aldehyde Dehydrogenase; KEGG: aha:AHA_3818 gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.783
Cwoe_2602
PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
 
   
 0.724
Cwoe_5715
PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_1515 FAD dependent oxidoreductase.
 
   
 0.720
Cwoe_3861
PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0095 hypothetical protein.
 
   
 0.694
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 0.693
bioB-2
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.671
Cwoe_5713
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll2947 hypothetical protein.
 
   
 0.633
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.604
Cwoe_3857
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll2947 hypothetical protein.
 
   
 0.600
Cwoe_0812
PFAM: FAD dependent oxidoreductase; KEGG: bpe:BP3109 hypothetical protein.
 
   
 0.493
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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