STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3467TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: GAD5; GAD5 (GLUTAMATE DECARBOXYLASE 5); calmodulin binding; K01580 glutamate decarboxylase; Belongs to the group II decarboxylase family. (457 aa)    
Predicted Functional Partners:
Cwoe_1817
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: mca:MCA2039 glutamate synthase, large subunit.
    
 0.953
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.947
Cwoe_4042
PFAM: aminotransferase class-III; KEGG: ppd:Ppro_0566 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.943
Cwoe_1420
PFAM: Aldehyde Dehydrogenase; KEGG: rso:RSc1456 putative betaine aldehyde dehydrogenase (BADH) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
   
 0.915
Cwoe_3163
PFAM: Aldehyde Dehydrogenase; KEGG: sfu:Sfum_0833 aldehyde dehydrogenase.
   
 0.915
Cwoe_4242
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dvl:Dvul_0009 glutamine synthetase, type I.
  
 
 0.914
Cwoe_0448
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rso:RSp0886 glutamine synthetase protein.
  
 
 0.913
Cwoe_4406
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; KEGG: hypothetical protein.
  
 
 0.911
Cwoe_4416
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pla:Plav_2794 glutamate--ammonia ligase.
  
 
 0.911
Cwoe_0703
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: mxa:MXAN_5873 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.909
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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