STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3567PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: mlo:mll6464 hypothetical protein. (282 aa)    
Predicted Functional Partners:
Cwoe_3568
PFAM: protein of unknown function DUF1326; KEGG: pna:Pnap_0464 hypothetical protein.
 
     0.955
Cwoe_3565
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: rfr:Rfer_3515 UbiE/COQ5 methyltransferase.
       0.658
Cwoe_3566
PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_3532 O-succinylbenzoate-CoA ligase.
       0.658
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
       0.511
menA
1,4-dihydroxy-2-naphthoateoctaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
       0.495
Cwoe_2414
PFAM: selenium-binding protein; KEGG: scl:sce6769 selenium-binding protein.
 
     0.488
Cwoe_3571
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mxa:MXAN_3531 putative O-succinylbenzoic acid synthase.
       0.464
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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