STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3646PFAM: transcriptional regulator PadR family protein; KEGG: bcm:Bcenmc03_1322 PadR-like family transcriptional regulator. (199 aa)    
Predicted Functional Partners:
Cwoe_3649
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1416 hypothetical protein.
       0.783
Cwoe_3647
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lhk:LHK_01829 LolD.
       0.781
Cwoe_3648
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2413 ABC transporter, ATP-binding protein.
       0.781
Cwoe_1177
PFAM: transcriptional regulator PadR family protein; KEGG: bbt:BBta_0813 PadR family transcriptional regulator.
  
     0.636
Cwoe_3650
Hypothetical protein; KEGG: sat:SYN_01806 putative cytoplasmic protein.
       0.625
Cwoe_5734
PFAM: transcriptional regulator PadR family protein; KEGG: bte:BTH_II1272 transcriptional regulator.
  
     0.596
Cwoe_0301
PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator.
  
     0.529
Cwoe_3645
TIGRFAM: DivIVA domain; KEGG: Axoneme-associated protein GASP-180.
       0.517
Cwoe_0247
KEGG: pmy:Pmen_4204 hypothetical protein.
 
    0.411
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.