STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4729PFAM: transcriptional regulator PadR family protein; KEGG: dal:Dalk_2104 transcriptional regulator, PadR- like family. (197 aa)    
Predicted Functional Partners:
Cwoe_4730
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pay:PAU_01887 similar to atp-binding component of abc transporter.
       0.778
Cwoe_5734
PFAM: transcriptional regulator PadR family protein; KEGG: bte:BTH_II1272 transcriptional regulator.
  
     0.767
Cwoe_4731
PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2042 hypothetical protein.
       0.758
Cwoe_0301
PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator.
  
     0.614
Cwoe_1177
PFAM: transcriptional regulator PadR family protein; KEGG: bbt:BBta_0813 PadR family transcriptional regulator.
  
     0.604
Cwoe_4728
Hypothetical protein; KEGG: GK20106 gene product from transcript GK20106- RA.
       0.530
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.