STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5867PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dal:Dalk_4445 peptidase M20. (434 aa)    
Predicted Functional Partners:
Cwoe_5866
PFAM: Quinolinate phosphoribosyl transferase; KEGG: ccv:CCV52592_0623 nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
 
  
 0.819
Cwoe_2784
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mca:MCA2083 acetylornithine deacetylase.
  
     0.773
Cwoe_5864
Hypothetical protein.
       0.615
Cwoe_5865
TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0655 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.615
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
    0.604
Cwoe_5863
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pca:Pcar_2304 hypothetical protein.
       0.589
Cwoe_5868
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ank:AnaeK_0767 recombination factor protein RarA.
       0.572
Cwoe_0937
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO5521 M20/M25/M40 family peptidase.
  
     0.565
Cwoe_4146
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eic:NT01EI_3020 carboxypeptidase family.
  
     0.481
Cwoe_2145
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO5521 M20/M25/M40 family peptidase.
  
     0.475
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.