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nlpE protein (Acinetobacter baumannii) - STRING interaction network
"nlpE" - Copper resistance protein NlpE in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
nlpECopper resistance protein NlpE; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)    
Predicted Functional Partners:
LV38_02531
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
 
          0.545
IX87_17710
Protein FilF; Derived by automated computational analysis using gene prediction method- Protein Homology (649 aa)
   
     
  0.502
mrcB
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (798 aa)
           
  0.408
fis
Bacterial regulatory, Fis family protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the transcriptional regulatory Fis family (89 aa)
           
  0.407
mlaD
Uncharacterized ABC transporter, periplasmic component YrbD; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
           
  0.400
rpoH
RNA polymerase sigma factor RpoH; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
           
  0.400
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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