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syrM1_1 protein (Acinetobacter baumannii) - STRING interaction network
"syrM1_1" - Bacterial regulatory helix-turn-helix, lysR family protein in Acinetobacter baumannii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syrM1_1Bacterial regulatory helix-turn-helix, lysR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)    
Predicted Functional Partners:
corC_2
Magnesium and cobalt efflux protein CorC; Derived by automated computational analysis using gene prediction method- Protein Homology (441 aa)
 
          0.599
AIL77140.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
   
        0.526
AB895_1007
DUF3108 domain-containing protein; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
   
          0.463
ABUW_0927
SCP-2 sterol transfer family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
   
          0.448
AIL80285.1
MacA family efflux pump subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (445 aa)
       
 
  0.444
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (664 aa)
           
  0.428
ABUW_3526
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.413
aceA
Isocitrate lyase; Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; Derived by automated computational analysis using gene prediction method- Protein Homology (534 aa)
 
          0.405
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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