STRINGSTRING
rubA protein (Acinetobacter baumannii) - STRING interaction network
"rubA" - Rubredoxin in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rubARubredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (54 aa)    
Predicted Functional Partners:
AIL77172.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)
     
  0.979
AIL80356.1
DNA polymerase I; Has 3’-5’ exonuclease, 5’-3’ exonuclease and 5’-3’polymerase activities, primarily functions to fill gaps during DNA replication and repair; Derived by automated computational analysis using gene prediction method- Protein Homology (923 aa)
         
  0.688
IX87_12690
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
   
        0.678
AIL79994.1
Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
           
  0.572
AIL80994.1
NADPH-dependent 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (674 aa)
   
 
  0.508
AIL78127.1
NADPH-dependent 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (676 aa)
   
 
  0.508
AIL78057.1
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
           
  0.499
AIL78050.1
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (516 aa)
           
  0.499
AIL77174.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
              0.496
hmp
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the globin family (254 aa)
   
   
  0.490
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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