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gcvA_3 protein (Acinetobacter baumannii) - STRING interaction network
"gcvA_3" - Bacterial regulatory helix-turn-helix, lysR family protein in Acinetobacter baumannii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
gcvA_3Bacterial regulatory helix-turn-helix, lysR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)    
Predicted Functional Partners:
AIL77195.1
Transketolase; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
 
          0.790
AIL77198.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
          0.790
AIL77196.1
Transketolase; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
          0.784
AIL77197.1
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (433 aa)
 
 
      0.577
dmlR_7
Bacterial regulatory helix-turn-helix, lysR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
   
          0.546
AIL79565.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
   
          0.529
AIL77256.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
   
          0.527
gbpR
Bacterial regulatory helix-turn-helix, lysR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
          0.472
AIL77566.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
   
          0.454
AIL79548.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
   
          0.446
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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