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ndoA protein (Acinetobacter baumannii) - STRING interaction network
"ndoA" - Naphthalene 1,2-dioxygenase system ferredoxin subunit in Acinetobacter baumannii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndoANaphthalene 1,2-dioxygenase system ferredoxin subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)    
Predicted Functional Partners:
AIL77215.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (403 aa)
 
  0.976
AIL77218.1
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
 
 
  0.962
AIL77219.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
 
        0.953
AIL77216.1
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
   
  0.894
AIL77217.1
Short-chain dehydrogenase; Member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
        0.894
cobA
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (457 aa)
   
   
  0.847
gudP_2
Major facilitator superfamily MFS_1; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
 
          0.779
ABUW_2946
Cupin domain-containing protein; Derived by automated computational analysis using gene prediction method- Protein Homology (173 aa)
 
          0.723
AIL77210.1
Aspartate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
 
          0.693
AIL77212.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
 
          0.687
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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