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pgaB protein (Acinetobacter baumannii) - STRING interaction network
"pgaB" - Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB in Acinetobacter baumannii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgaBPoly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB; Derived by automated computational analysis using gene prediction method- Protein Homology (664 aa)    
Predicted Functional Partners:
AIL77226.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (419 aa)
 
   
  0.982
ABUW_2958
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
 
        0.960
AIL78352.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
 
   
  0.900
AIL78354.1
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA; Derived by automated computational analysis using gene prediction method- Protein Homology (812 aa)
 
   
  0.747
AIL78778.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (416 aa)
 
   
  0.633
AIL81043.1
PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
         
  0.584
AIL78424.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
   
  0.541
AB895_3107
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
     
        0.538
pgaD
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
 
          0.499
AIL79014.1
Lipid A phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
   
        0.494
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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