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caiT protein (Acinetobacter baumannii) - STRING interaction network
"caiT" - L-carnitine/gamma-butyrobetaine antiporter in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caiTL-carnitine/gamma-butyrobetaine antiporter; Member of the betaine, carnitine, choline transporter (BCCT) family; unknown function; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)    
Predicted Functional Partners:
AIL77426.1
Lipase; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
 
          0.868
dmlA
Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
 
          0.799
AIL77425.1
Ring-hydroxylating oxygenase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
          0.769
dmlR
HTH-type transcriptional regulator DmlR; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
          0.623
AIL77424.1
Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method- Protein Homology (483 aa)
   
   
  0.567
AIL77423.1
Ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)
 
          0.526
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (316 aa)
           
  0.408
IX87_14890
UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family (376 aa)
           
  0.406
AIL78781.1
UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family (378 aa)
           
  0.406
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (273 aa)
           
  0.400
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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