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bigR protein (Acinetobacter baumannii) - STRING interaction network
"bigR" - Bacterial regulatory, arsR family protein in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bigRBacterial regulatory, arsR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (102 aa)    
Predicted Functional Partners:
ABUW_1846
YeeE/YedE family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (137 aa)
 
          0.624
AB895_3717
Sulfur transport family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (137 aa)
 
          0.613
AIL80966.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
     
  0.586
AIL80701.1
NAD(FAD)-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (551 aa)
 
   
  0.441
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (460 aa)
     
 
  0.438
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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