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pcaR_1 protein (Acinetobacter baumannii) - STRING interaction network
"pcaR_1" - Bacterial transcriptional regulator family protein in Acinetobacter baumannii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaR_1Bacterial transcriptional regulator family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)    
Predicted Functional Partners:
AIL77730.1
3-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
        0.719
AIL77731.1
Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
   
  0.644
pcaU
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
   
          0.576
AIL77723.1
Porin; Derived by automated computational analysis using gene prediction method- Protein Homology (438 aa)
 
          0.574
AIL77726.1
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
          0.547
AIL77729.1
3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
        0.534
AIL77341.1
Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
   
          0.424
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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