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soxR protein (Acinetobacter baumannii) - STRING interaction network
"soxR" - Redox-sensitive transcriptional activator SoxR in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
soxRRedox-sensitive transcriptional activator SoxR; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)    
Predicted Functional Partners:
acrR
HTH-type transcriptional regulator AcrR; Derived by automated computational analysis using gene prediction method- Protein Homology (207 aa)
   
     
  0.532
AIL77174.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
       
 
  0.507
IX87_03845
Hemolysin; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
              0.500
marR
Multiple antibiotic resistance protein MarR; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
           
  0.498
ABUW_2556
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
              0.477
acrA
AdeA/AdeI family multidrug efflux RND transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (416 aa)
           
  0.476
rsbP
Serine phosphatase RsbU, regulator of sigma subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
     
 
  0.468
ahpC
Alkyl hydroperoxide reductase protein C; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
           
  0.466
barA
Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (935 aa)
   
 
  0.460
cmpR_2
Bacterial regulatory helix-turn-helix, lysR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
     
 
  0.457
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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