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prsE protein (Acinetobacter baumannii) - STRING interaction network
"prsE" - HlyD family type I secretion periplasmic adaptor subunit in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prsEHlyD family type I secretion periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (396 aa)    
Predicted Functional Partners:
AIL77889.1
Type I secretion system permease/ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (713 aa)
   
  0.998
tolC_2
Type I secretion system, outer membrane component LapE; Derived by automated computational analysis using gene prediction method- Protein Homology (488 aa)
 
  0.983
AIL80028.1
RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
   
 
  0.655
AIL80866.1
RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (442 aa)
   
 
  0.643
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (664 aa)
   
 
  0.619
AIL77887.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
              0.590
AIL77886.1
Acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
         
  0.589
AIL78927.1
Type I secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (3276 aa)
 
   
  0.444
AIL80620.1
Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
   
 
  0.441
IX87_12930
CusA/CzcA family heavy metal efflux RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1052 aa)
   
 
  0.441
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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