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lptB protein (Acinetobacter baumannii) - STRING interaction network
"lptB" - Lipopolysaccharide ABC transporter, ATP-binding protein LptB in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
lptBLipopolysaccharide ABC transporter, ATP-binding protein LptB; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)    
Predicted Functional Partners:
AIL80002.1
LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
 
 
  0.997
lptF
Lipopolysaccharide export system permease protein LptF; Derived by automated computational analysis using gene prediction method- Protein Homology (366 aa)
   
  0.994
lptC
Lipopolysaccharide-assembly, LptC-related family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
   
 
  0.970
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (182 aa)
   
   
  0.965
AIL77895.1
Arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
        0.901
AIL77894.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
  0.886
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (262 aa)
 
   
  0.662
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (169 aa)
           
  0.657
lpxD
UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily (356 aa)
 
   
  0.653
AB895_3260
MotA/TolQ/ExbB proton channel family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
 
          0.647
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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