STRINGSTRING
loiP protein (Acinetobacter baumannii) - STRING interaction network
"loiP" - Zn-dependent protease with chaperone function in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
loiPZn-dependent protease with chaperone function; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)    
Predicted Functional Partners:
ABUW_2744
Putative membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)
              0.559
yiaD
Outer membrane lipoprotein omp16; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (217 aa)
   
        0.543
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (664 aa)
 
        0.528
AIL79280.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (647 aa)
   
        0.468
AIL79188.1
Sensor histidine kinase efflux regulator BaeS; Derived by automated computational analysis using gene prediction method- Protein Homology (552 aa)
     
        0.430
mlaB
Putative toluene-tolerance protein (Ttg2E); Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
     
        0.426
AIL78828.1
29 kDa outer membrane protein; May be involved in transporting molecules across the outer membrane (249 aa)
     
        0.426
mlaD
Uncharacterized ABC transporter, periplasmic component YrbD; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
     
        0.424
AIL78349.1
LLM class flavin-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
     
        0.418
AIL78461.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
     
        0.414
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
Server load: low (8%) [HD]