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AIL77976.1 protein (Acinetobacter baumannii) - STRING interaction network
"AIL77976.1" - DNA polymerase V in Acinetobacter baumannii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
AIL77976.1DNA polymerase V; Derived by automated computational analysis using gene prediction method- Protein Homology (164 aa)    
Predicted Functional Partners:
AIL77977.1
Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
  0.984
AIL77278.1
Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
  0.903
AIL81178.1
DNA polymerase V subunit UmuC; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
  0.902
AIL78165.1
Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
  0.902
AIL81167.1
DNA methylase; Derived by automated computational analysis using gene prediction method- Protein Homology (442 aa)
 
  0.902
AIL77978.1
Derived by automated computational analysis using gene prediction method- GeneMarkS+ (138 aa)
              0.713
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (351 aa)
 
 
  0.582
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (349 aa)
   
 
  0.561
AIL77975.1
Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
              0.556
AIL77974.1
Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
              0.401
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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