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AIL78146.1 protein (Acinetobacter baumannii) - STRING interaction network
"AIL78146.1" - 16S rRNA in Acinetobacter baumannii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL78146.116S rRNA (Cytidine(1402)-2’-O)-methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)    
Predicted Functional Partners:
gidB
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (210 aa)
 
     
  0.774
ABUW_2846
UPF0102 protein A7A65_00315; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0102 family (133 aa)
   
        0.681
AIL80324.1
GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (768 aa)
 
        0.669
AIL79435.1
RelA/SpoT family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (701 aa)
 
        0.645
AIL80092.1
RNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family (249 aa)
 
   
  0.639
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (342 aa)
 
        0.627
AIL79749.1
16S rRNA (Cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (434 aa)
   
   
  0.616
AIL80527.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (350 aa)
   
 
  0.613
AIL78147.1
Hemin receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
              0.581
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex (73 aa)
 
        0.575
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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