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IX87_06615 protein (Acinetobacter baumannii) - STRING interaction network
"IX87_06615" - Ion transport protein in Acinetobacter baumannii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX87_06615Ion transport protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain; Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology (1493 aa)
   
   
  0.623
ABUW_1594
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
              0.523
catM
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family); Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
       
 
  0.509
barA
Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (935 aa)
     
 
  0.507
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1397 aa)
       
 
  0.477
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (628 aa)
     
 
  0.464
rpoH
RNA polymerase sigma factor RpoH; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
     
 
  0.464
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (335 aa)
     
 
  0.449
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1362 aa)
       
 
  0.446
AIL79434.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)
       
      0.440
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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