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pgaD protein (Acinetobacter baumannii) - STRING interaction network
"pgaD" - Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgaDPoly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)    
Predicted Functional Partners:
AIL78354.1
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA; Derived by automated computational analysis using gene prediction method- Protein Homology (812 aa)
 
          0.965
AIL78353.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (609 aa)
 
          0.961
AIL78352.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
 
          0.930
AIL80189.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
   
          0.704
AIL80249.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (184 aa)
   
          0.643
AIL80668.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)
   
          0.633
AIL80392.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
   
          0.620
AIL79368.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.603
AIL80025.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (354 aa)
   
          0.594
AIL77259.1
Outer membrane porin, OprD family; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
   
          0.586
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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