STRINGSTRING
cyoE protein (Acinetobacter baumannii) - STRING interaction network
"cyoE" - Protoheme IX farnesyltransferase in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (292 aa)    
Predicted Functional Partners:
cyoB
Cytochrome bo(3) ubiquinol oxidase subunit 1; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (663 aa)
  0.999
cyoC
Cytochrome bo(3) ubiquinol oxidase subunit 3; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
 
  0.999
cyoA
Ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
 
  0.999
cyoD
Cytochrome bo(3) ubiquinol oxidase subunit 4; Derived by automated computational analysis using gene prediction method- Protein Homology (109 aa)
 
 
  0.998
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (338 aa)
     
 
  0.937
AIL77249.1
Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
     
 
    0.901
AIL80356.1
DNA polymerase I; Has 3’-5’ exonuclease, 5’-3’ exonuclease and 5’-3’polymerase activities, primarily functions to fill gaps during DNA replication and repair; Derived by automated computational analysis using gene prediction method- Protein Homology (923 aa)
   
   
  0.751
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (792 aa)
         
  0.705
AIL78684.1
Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
   
   
  0.547
hmp
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the globin family (254 aa)
   
   
  0.544
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
Server load: low (10%) [HD]