STRINGSTRING
ubiA protein (Acinetobacter baumannii) - STRING interaction network
"ubiA" - 4-hydroxybenzoate octaprenyltransferase in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiA4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (292 aa)    
Predicted Functional Partners:
ubiC
Probable chorismate pyruvate-lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family (169 aa)
   
 
  0.991
ispB
All-trans-nonaprenyl-diphosphate synthase (Geranyl-diphosphate specific); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FPP/GGPP synthase family (325 aa)
 
 
  0.915
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (237 aa)
 
 
  0.852
AIL78154.1
Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
   
   
  0.813
AIL80116.1
Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
 
 
 
  0.762
AIL79362.1
Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (316 aa)
 
   
  0.711
AIL78153.1
FAD-dependent monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)
   
   
  0.705
AIL80114.1
2-octaprenylphenol hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (539 aa)
 
   
  0.605
glnA
Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (469 aa)
   
   
  0.576
AIL78593.1
Derived by automated computational analysis using gene prediction method- Protein Homology (435 aa)
   
        0.571
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
Server load: low (10%) [HD]