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degP protein (Acinetobacter baumannii) - STRING interaction network
"degP" - Periplasmic serine endoprotease DegP-like in Acinetobacter baumannii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
degPPeriplasmic serine endoprotease DegP-like; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S1C family (458 aa)    
Predicted Functional Partners:
omp38
Outer membrane protein Omp38; Porin. Induces apoptosis in human laryngeal epithelial HEp-2 cells through caspases-dependent and AIF-dependent pathways. Purified Omp38 enters the cells and localizes to the mitochondria, which leads to a release of proapoptotic molecules such as cytochrome c and AIF (apoptosis-inducing factor); Belongs to the OmpA family (356 aa)
     
 
  0.603
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (201 aa)
   
 
  0.599
fkpA
Peptidyl-prolyl cis-trans isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
     
 
  0.598
def1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (176 aa)
 
   
  0.579
clpX
Binds and unfolds substrates as part of the ClpXP protease; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
     
  0.561
surA
Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (436 aa)
   
 
  0.560
AIL78723.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
   
   
  0.558
IX87_09290
Acyl-ACP thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
              0.545
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (297 aa)
 
   
  0.541
AIL78817.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (549 aa)
              0.532
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
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