STRINGSTRING
AIL78877.1 protein (Acinetobacter baumannii) - STRING interaction network
"AIL78877.1" - Multidrug ABC transporter permease in Acinetobacter baumannii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL78877.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (363 aa)    
Predicted Functional Partners:
AIL78876.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
          0.995
emrA_4
HlyD family secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (373 aa)
 
 
  0.931
LV38_04090
Outer membrane efflux protein; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
     
  0.901
AIL80654.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (585 aa)
 
 
  0.454
AIL80655.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
   
          0.445
AIL78880.1
Polysaccharide biosynthesis protein GtrA; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
              0.431
AIL78879.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
              0.431
AIL78878.1
ChbG/HpnK family deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
              0.431
AIL78881.1
Dolichyl-phosphate-mannose--protein mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
              0.427
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (270 aa)
 
   
  0.419
Your Current Organism:
Acinetobacter baumannii
NCBI taxonomy Id: 470
Other names: A. baumannii, ATCC 19606, Acinetobacter baumannii, Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum, CCUG 19096, CIP 70.34, DSM 30007, JCM 6841, NCCB 85021, NCTC 12156
Server load: low (10%) [HD]