STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. (309 aa)    
Predicted Functional Partners:
ACS23846.1
PFAM: cytochrome c oxidase subunit III; KEGG: gka:GK1084 cytochrome c oxidase subunit III.
 
 
 0.999
ACS23844.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.998
ACS23845.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.997
ctaA
Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.
 0.996
ACS23847.1
KEGG: gtn:GTNG_0950 cytochrome caa3-type oxidase IV; TIGRFAM: cytochrome c oxidase, subunit IV; PFAM: cytochrome C oxidase subunit IV.
 
 
 0.996
ACS24635.1
PFAM: cytochrome c oxidase subunit I; KEGG: afl:Aflv_1359 cytochrome c oxidase (b(o/a)3-type) chain I; Belongs to the heme-copper respiratory oxidase family.
 
 0.988
ACS24634.1
PFAM: cytochrome c oxidase subunit II; blue (type 1) copper domain protein; KEGG: gka:GK1547 cytochrome c oxidase (b(o/a)3-type) chain II.
 
 
 0.978
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.943
ACS26005.1
Chlorite dismutase; May function as heme-dependent peroxidase.
  
  
  0.931
ACS24383.1
PFAM: electron transport protein SCO1/SenC; KEGG: gtn:GTNG_1666 SCO1/SenC family lipoprotein.
 
  
 0.617
Your Current Organism:
Geobacillus sp. WCH70
NCBI taxonomy Id: 471223
Other names: G. sp. WCH70
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