STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS23861.1TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: gtn:GTNG_0965 hypothetical protein. (406 aa)    
Predicted Functional Partners:
ACS25124.1
TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: gtn:GTNG_2432 hypothetical protein.
 
   
 0.834
ACS25960.1
TIGRFAM: stage II sporulation protein R; KEGG: gka:GK3376 stage II sporulation protein R (pro-sigma-E processing factor).
  
   
 0.805
ACS23889.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
   
 0.801
ACS25123.1
TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: gka:GK2494 stage IV sporulation protein.
 
   
 0.787
ACS25923.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: gtn:GTNG_3276 stage III sporulation protein D.
  
  
 0.782
ACS25036.1
TIGRFAM: stage III sporulation protein AE; KEGG: gtn:GTNG_2335 stage III sporulation protein AE.
  
    0.778
ACS25037.1
TIGRFAM: stage III sporulation protein AD; KEGG: gka:GK2405 stage III sporulation protein AD.
  
     0.772
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.772
ACS25402.1
TIGRFAM: sporulation protein YtfJ; KEGG: gka:GK2788 hypothetical protein.
  
    0.770
ACS23001.1
KEGG: gtn:GTNG_0057 serine phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
  
     0.766
Your Current Organism:
Geobacillus sp. WCH70
NCBI taxonomy Id: 471223
Other names: G. sp. WCH70
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