STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0318PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bac:BamMC406_1201 short-chain dehydrogenase/reductase SDR. (301 aa)    
Predicted Functional Partners:
Tcur_0319
PFAM: Carboxymuconolactone decarboxylase; KEGG: dol:Dole_1053 carboxymuconolactone decarboxylase.
 
     0.940
Tcur_2793
PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: plu:plu4194 hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.624
Tcur_0214
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pla:Plav_1760 short-chain dehydrogenase/reductase SDR.
 
 
 
 0.605
Tcur_4195
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dde:Dde_2429 3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
 
 0.605
Tcur_0388
PFAM: secretory lipase; KEGG: reh:H16_A0876 secretory lipase.
 
     0.562
Tcur_1223
PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: scl:sce5302 3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
 
 0.534
Tcur_0321
PFAM: secretory lipase; KEGG: reh:H16_A0876 secretory lipase.
 
     0.516
Tcur_3579
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: atc:AGR_L_1280 probable short-chain dehydrogenase PA0658; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.487
Tcur_1833
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pzu:PHZ_c0051 oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.419
Tcur_0436
PFAM: regulatory protein TetR; KEGG: dal:Dalk_1538 transcriptional regulator, TetR family.
  
     0.417
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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