STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0880KEGG: azc:AZC_0422 hypothetical protein. (223 aa)    
Predicted Functional Partners:
Tcur_0879
PFAM: helix-turn-helix HxlR type; KEGG: geo:Geob_0974 transcriptional regulator, HxlR family.
 
  
 0.802
Tcur_2656
PFAM: permease; KEGG: dal:Dalk_1552 permease.
  
    0.708
Tcur_2601
KEGG: mxa:MXAN_2390 hypothetical protein.
  
    0.632
Tcur_3541
PFAM: GCN5-related N-acetyltransferase; KEGG: oca:OCAR_6240 acetyltransferase.
  
    0.632
Tcur_3758
PFAM: CsbD family protein; KEGG: mes:Meso_1219 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.622
Tcur_3094
PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: dal:Dalk_2335 domain of unknown function DUF1731.
   
    0.617
arcA
Arginine deiminase; PFAM: amidinotransferase; KEGG: oan:Oant_4646 arginine deiminase.
   
    0.610
Tcur_0324
PFAM: NmrA family protein; KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase.
 
    0.496
Tcur_1991
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: lch:Lcho_1064 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.492
Tcur_2662
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: pzu:PHZ_c3078 putative pyridoxamine 5'- phosphate oxidase-related, FMN-binding.
  
    0.492
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.