STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0901PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase. (350 aa)    
Predicted Functional Partners:
Tcur_2989
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gur:Gura_4141 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.916
Tcur_3960
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: hypothetical protein.
    
 0.916
Tcur_4201
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bbt:BBta_0953 putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.916
Tcur_1345
PFAM: NERD domain protein; KEGG: mpt:Mpe_A3609 hypothetical protein.
 
    0.709
Tcur_1100
SMART: AAA ATPase; KEGG: rsq:Rsph17025_4376 type IV secretion/conjugal transfer ATPase.
 
 
   0.665
Tcur_0226
PFAM: protein of unknown function DUF88; KEGG: Hypothetical protein CBG04553.
 
     0.638
Tcur_2244
PFAM: sulfotransferase; KEGG: similar to Dermatan-sulfate epimerase-like protein.
 
   
 0.635
Tcur_3184
Hypothetical protein.
 
   
 0.596
Tcur_4966
Hypothetical protein.
  
     0.573
Tcur_0584
KEGG: hypothetical protein.
 
   
 0.563
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.