STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0940Hypothetical protein; KEGG: pen:PSEEN5551 chromosomal partitioning protein ParB. (590 aa)    
Predicted Functional Partners:
Tcur_4978
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gsu:GSU0106 soj protein.
  
 
 0.821
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.726
Tcur_2833
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gur:Gura_4256 cobyrinic acid a,c-diamide synthase.
  
 
 0.715
Tcur_2050
KEGG: bja:bll0558 hypothetical protein.
  
     0.631
Tcur_4839
KEGG: Os06g0106000; hypothetical protein; K03609 septum site-determining protein MinD.
  
 
 0.631
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.607
Tcur_0813
PFAM: TROVE domain protein; KEGG: bbt:BBta_3746 hypothetical protein.
  
     0.597
Tcur_4662
PFAM: beta-lactamase domain protein; KEGG: scl:sce5265 Beta-lactamase.
  
   
 0.549
Tcur_1275
Acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein; KEGG: bja:bll0558 hypothetical protein.
  
     0.526
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
  
 0.479
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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