STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0959PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_1780 acyl-CoA synthetase. (512 aa)    
Predicted Functional Partners:
Tcur_0359
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Non- ribosomal peptide synthetase; phosphopantetheine-binding; condensation domain protein; KEGG: pfl:PFL_3493 pyochelin synthetase E.
 
0.926
Tcur_1885
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce2387 non-ribosomal peptide synthetase.
 
0.917
Tcur_0958
KEGG: cak:Caul_1118 alpha/beta hydrolase fold.
 
     0.801
Tcur_0960
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: reu:Reut_A1568 acyl-CoA dehydrogenase, C- terminal.
  
  
 0.795
Tcur_2782
PFAM: Beta-ketoacyl synthase; Acyl transferase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase.
 
 0.792
Tcur_0957
PFAM: homogentisate 12-dioxygenase; KEGG: pmy:Pmen_1697 homogentisate 1,2-dioxygenase.
       0.773
Tcur_1886
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
  
 
0.758
Tcur_1887
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: avi:Avi_9643 peptide synthetase.
  
 
0.758
Tcur_0956
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpa:RPA1710 putative acyl-CoA dehydrogenase.
  
  
 0.706
Tcur_0955
Vinylacetyl-CoA Delta-isomerase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: dal:Dalk_3391 vinylacetyl-CoA delta-isomerase.
       0.681
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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