STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1069PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: eba:p2A352 pyridoxamine 5'-phosphate oxidase. (158 aa)    
Predicted Functional Partners:
Tcur_3983
PFAM: protein of unknown function DUF35; KEGG: dal:Dalk_3343 protein of unknown function DUF35.
 
     0.727
Tcur_3982
Acetyl-CoA acetyltransferase-like protein; KEGG: dal:Dalk_4047 propanoyl-CoA C-acyltransferase.
 
     0.613
rnz
Beta-lactamase domain protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.554
Tcur_1658
PFAM: protein of unknown function DUF75; KEGG: sfu:Sfum_3209 hypothetical protein.
  
    0.497
Tcur_3981
KEGG: dal:Dalk_4048 propanoyl-CoA C-acyltransferase.
  
     0.477
Tcur_1071
PFAM: protein of unknown function DUF255; KEGG: acp:A2cp1_1001 protein of unknown function DUF255.
       0.435
Tcur_4771
KEGG: rme:Rmet_0542 hypothetical protein.
 
     0.432
Tcur_2180
PFAM: VWA containing CoxE family protein; KEGG: mxa:MXAN_3786 hypothetical protein.
  
     0.431
Tcur_3500
PFAM: regulatory protein TetR; KEGG: pmy:Pmen_1681 TetR family transcriptional regulator.
  
     0.404
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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