STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1108KEGG: rpc:RPC_1418 hypothetical protein. (139 aa)    
Predicted Functional Partners:
Tcur_1113
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: hch:HCH_02787 serine/threonine protein kinase.
 
    0.546
Tcur_1111
PFAM: ATPase AAA-2 domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bcn:Bcen_1418 ATPase AAA-2.
  
  
 0.494
Tcur_1109
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: PRB3; proline-rich protein BstNI subfamily 3.
     
 0.484
Tcur_1112
KEGG: ade:Adeh_2705 response regulator receiver.
       0.479
Tcur_1110
KEGG: pap:PSPA7_2529 putative radical activating enzyme.
       0.477
Tcur_2832
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.473
Tcur_4452
PFAM: histone deacetylase superfamily; KEGG: gsu:GSU1222 histone deacetylase/AcuC/AphA family protein.
   
 0.443
Tcur_2663
PFAM: aminoglycoside phosphotransferase; KEGG: bba:Bd2045 homoserine kinase.
 
     0.424
Tcur_1266
KEGG: Hypothetical protein CBG02561.
 
 
 0.423
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.407
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.